Chemistry software hints
Skip to end of metadata
Go to start of metadata

You are viewing an old version of this page. View the current version.

Compare with Current View Page History

« Previous Version 9 Next »

For help with SciFinder and other library related material, see this wonderful resource.

Spartan is available on nscc, all seven PCs in the schupf lab, and on all

wet lab imaged macs in Keyes.Do not use spartan04 on the macs in the schupflab,

instead use spartan from the application window. These macs run spartan remotely from iris13 over

an X windows connection. Under Mac 10.5.6 you may need to alter the

permissions with X11. Fire up X11, pull down the X11 menu and select

preferences, then under the security tab, allow connection from the network:

MOE short hints (PDF)

Gaussian 03 online manual is here.

 Spartan command line options:

spartan --help

  --monitor             : Run the Spartan Monitor
  --arch                : Display the CPU architecture of this machine
  --submit [opt] <path> : Submit backend jobs
      --external-queue <queue_name>
      --verbose <level>
  --foreground-submit   : Submit backend jobs waiting for job to complete
  --process-commands    : Process job command file
  --unpack              : Unpack a .spartan file to Unix style format
  --convert <old> <new> : Command line conversion utility
  --select              : Return graphics mode
  -inuse [-status]    : Inuse status
  -inuse [add|-remove] : Modify inuse state
  --library-path        : Print LD_LIBRARY_PATH
  --root-path           : Print the spartan root path
  --ldd                 : Print the spartan GUI libary dependencies
  --ldd-analysis <???>  : Print module library dependencies
  --ldd-so <lib???.so>  : Print library dependencies

The following needs to be set to use mm3 in the schupflab:

 add these two lines to your .cshrc

setenv MM32000ROOT /export/local/src
source $MM32000ROOT/mm32000/mm32000.cnf

  • No labels